Arid5b syntax in mouse based on all samples
Summary of Arid5b
Gene name: Arid5b, AT-rich interaction domain 5B
Number of Arid5b PWM hits (motifs) on mouse genome: 147,192
Number of Arid5b PWM hits (motifs) on mouse accessible genome: 30,565
Number of summits with Arid5b motif per sample (min/median/max): 104 / 814 / 2,716
Number of summits with Arid5b footprinting per sample (min/median/max): 3 / 44 / 202
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (467,406 extended summits (401bp) with Arid5b motifs)
Footprinting-based (14,207 extended summits (401bp) with Arid5b footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Arid5b partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Arid5b.
The number of Arid5b partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Arid5b.
View Arid5b in a specific mouse sample

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