CDX1 syntax in human based on all samples
Summary of CDX1
Gene name: CDX1, caudal type homeobox 1
Number of CDX1 PWM hits (motifs) on human genome: 153,595
Number of CDX1 PWM hits (motifs) on human accessible genome: 29,839
Number of summits with CDX1 motif per sample (min/median/max): 203 / 988 / 3,219
Number of summits with CDX1 footprinting per sample (min/median/max): 4 / 48 / 224
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (45,622 extended summits (401bp) with CDX1 motifs)
Footprinting-based (1,521 extended summits (401bp) with CDX1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of CDX1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is CDX1.
The number of CDX1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is CDX1.
View CDX1 in a specific human sample

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