Cdx1 syntax in mouse based on all samples
Summary of Cdx1
Gene name: Cdx1, caudal type homeobox 1
Number of Cdx1 PWM hits (motifs) on mouse genome: 131,535
Number of Cdx1 PWM hits (motifs) on mouse accessible genome: 30,874
Number of summits with Cdx1 motif per sample (min/median/max): 293 / 790 / 3,173
Number of summits with Cdx1 footprinting per sample (min/median/max): 2 / 32 / 214
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (40,211 extended summits (401bp) with Cdx1 motifs)
Footprinting-based (856 extended summits (401bp) with Cdx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Cdx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Cdx1.
The number of Cdx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Cdx1.
View Cdx1 in a specific mouse sample

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