Gcm1 syntax in mouse based on all samples
Summary of Gcm1
Gene name: Gcm1, glial cells missing transcription factor 1
Number of Gcm1 PWM hits (motifs) on mouse genome: 112,591
Number of Gcm1 PWM hits (motifs) on mouse accessible genome: 33,067
Number of summits with Gcm1 motif per sample (min/median/max): 1,752 / 2,599 / 3,890
Number of summits with Gcm1 footprinting per sample (min/median/max): 108 / 151 / 209
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (30,426 extended summits (401bp) with Gcm1 motifs)
Footprinting-based (1,100 extended summits (401bp) with Gcm1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gcm1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gcm1.
The number of Gcm1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gcm1.
View Gcm1 in a specific mouse sample

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