Gsx2 syntax in mouse based on all samples
Summary of Gsx2
Gene name: Gsx2, GS homeobox 2
Number of Gsx2 PWM hits (motifs) on mouse genome: 135,041
Number of Gsx2 PWM hits (motifs) on mouse accessible genome: 30,000
Number of summits with Gsx2 motif per sample (min/median/max): 679 / 1,984 / 6,365
Number of summits with Gsx2 footprinting per sample (min/median/max): 15 / 129 / 294
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (60,537 extended summits (401bp) with Gsx2 motifs)
Footprinting-based (2,098 extended summits (401bp) with Gsx2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gsx2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gsx2.
The number of Gsx2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gsx2.
View Gsx2 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.