Gtf2i syntax in mouse based on all samples
Summary of Gtf2i
Gene name: Gtf2i, general transcription factor IIi
Number of Gtf2i PWM hits (motifs) on mouse genome: 569,130
Number of Gtf2i PWM hits (motifs) on mouse accessible genome: 187,512
Number of summits with Gtf2i motif per sample (min/median/max): 3,388 / 11,815 / 26,342
Number of summits with Gtf2i footprinting per sample (min/median/max): 172 / 657 / 1,485
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (4,683,393 extended summits (401bp) with Gtf2i motifs)
Footprinting-based (183,107 extended summits (401bp) with Gtf2i footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gtf2i partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gtf2i.
The number of Gtf2i partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gtf2i.
View Gtf2i in a specific mouse sample

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