Gtf2ird1 syntax in mouse based on all samples
Summary of Gtf2ird1
Gene name: Gtf2ird1, GTF2I repeat domain containing 1
Number of Gtf2ird1 PWM hits (motifs) on mouse genome: 56,750
Number of Gtf2ird1 PWM hits (motifs) on mouse accessible genome: 20,191
Number of summits with Gtf2ird1 motif per sample (min/median/max): 746 / 2,040 / 4,328
Number of summits with Gtf2ird1 footprinting per sample (min/median/max): 38 / 136 / 315
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (780,429 extended summits (401bp) with Gtf2ird1 motifs)
Footprinting-based (33,699 extended summits (401bp) with Gtf2ird1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Gtf2ird1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Gtf2ird1.
The number of Gtf2ird1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Gtf2ird1.
View Gtf2ird1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.