Hmbox1 syntax in mouse based on all samples
Summary of Hmbox1
Gene name: Hmbox1, homeobox containing 1
Number of Hmbox1 PWM hits (motifs) on mouse genome: 47,187
Number of Hmbox1 PWM hits (motifs) on mouse accessible genome: 12,575
Number of summits with Hmbox1 motif per sample (min/median/max): 40 / 352 / 1,192
Number of summits with Hmbox1 footprinting per sample (min/median/max): 1 / 20 / 85
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (207,574 extended summits (401bp) with Hmbox1 motifs)
Footprinting-based (6,822 extended summits (401bp) with Hmbox1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hmbox1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hmbox1.
The number of Hmbox1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hmbox1.
View Hmbox1 in a specific mouse sample

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