Hoxb1 syntax in mouse based on all samples
Summary of Hoxb1
Gene name: Hoxb1, homeobox B1
Number of Hoxb1 PWM hits (motifs) on mouse genome: 332,524
Number of Hoxb1 PWM hits (motifs) on mouse accessible genome: 52,388
Number of summits with Hoxb1 motif per sample (min/median/max): 279 / 2,242 / 4,225
Number of summits with Hoxb1 footprinting per sample (min/median/max): 11 / 80 / 162
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (29,293 extended summits (401bp) with Hoxb1 motifs)
Footprinting-based (497 extended summits (401bp) with Hoxb1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxb1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxb1.
The number of Hoxb1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxb1.
View Hoxb1 in a specific mouse sample

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