Hoxb13 syntax in mouse based on all samples
Summary of Hoxb13
Gene name: Hoxb13, homeobox B13
Number of Hoxb13 PWM hits (motifs) on mouse genome: 240,233
Number of Hoxb13 PWM hits (motifs) on mouse accessible genome: 30,948
Number of summits with Hoxb13 motif per sample (min/median/max): 359 / 873 / 1,039
Number of summits with Hoxb13 footprinting per sample (min/median/max): 6 / 21 / 53
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (18,033 extended summits (401bp) with Hoxb13 motifs)
Footprinting-based (207 extended summits (401bp) with Hoxb13 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxb13 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxb13.
The number of Hoxb13 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxb13.
View Hoxb13 in a specific mouse sample

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