Hoxc12 syntax in mouse based on all samples
Summary of Hoxc12
Gene name: Hoxc12, homeobox C12
Number of Hoxc12 PWM hits (motifs) on mouse genome: 30,859
Number of Hoxc12 PWM hits (motifs) on mouse accessible genome: 7,898
Number of summits with Hoxc12 motif per sample (min/median/max): 45 / 446 / 1,123
Number of summits with Hoxc12 footprinting per sample (min/median/max): 3 / 19 / 74
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (11,801 extended summits (401bp) with Hoxc12 motifs)
Footprinting-based (372 extended summits (401bp) with Hoxc12 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxc12 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Hoxc12.
The number of Hoxc12 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Hoxc12.
View Hoxc12 in a specific mouse sample

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