Isx syntax in mouse based on all samples
Summary of Isx
Gene name: Isx, intestine specific homeobox
Number of Isx PWM hits (motifs) on mouse genome: 19,428
Number of Isx PWM hits (motifs) on mouse accessible genome: 5,912
Number of summits with Isx motif per sample (min/median/max): 42 / 153 / 429
Number of summits with Isx footprinting per sample (min/median/max): 1 / 8 / 17
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,482 extended summits (401bp) with Isx motifs)
Footprinting-based (58 extended summits (401bp) with Isx footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Isx partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Isx.
The number of Isx partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Isx.
View Isx in a specific mouse sample

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