LHX2 syntax in human based on all samples
Summary of LHX2
Gene name: LHX2, LIM homeobox 2
Number of LHX2 PWM hits (motifs) on human genome: 263,606
Number of LHX2 PWM hits (motifs) on human accessible genome: 45,744
Number of summits with LHX2 motif per sample (min/median/max): 612 / 1,190 / 4,435
Number of summits with LHX2 footprinting per sample (min/median/max): 31 / 67 / 267
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (79,941 extended summits (401bp) with LHX2 motifs)
Footprinting-based (2,024 extended summits (401bp) with LHX2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of LHX2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is LHX2.
The number of LHX2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is LHX2.
View LHX2 in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.