Lcor syntax in mouse based on all samples
Summary of Lcor
Gene name: Lcor, ligand dependent nuclear receptor corepressor
Number of Lcor PWM hits (motifs) on mouse genome: 49,844
Number of Lcor PWM hits (motifs) on mouse accessible genome: 10,932
Number of summits with Lcor motif per sample (min/median/max): 24 / 217 / 1,446
Number of summits with Lcor footprinting per sample (min/median/max): 1 / 9 / 120
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (167,158 extended summits (401bp) with Lcor motifs)
Footprinting-based (3,811 extended summits (401bp) with Lcor footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lcor partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Lcor.
The number of Lcor partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Lcor.
View Lcor in a specific mouse sample

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