Lhx5 syntax in mouse based on all samples
Summary of Lhx5
Gene name: Lhx5, LIM homeobox 5
Number of Lhx5 PWM hits (motifs) on mouse genome: 109,056
Number of Lhx5 PWM hits (motifs) on mouse accessible genome: 20,219
Number of summits with Lhx5 motif per sample (min/median/max): 31 / 986 / 3,348
Number of summits with Lhx5 footprinting per sample (min/median/max): 1 / 84 / 255
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (72,453 extended summits (401bp) with Lhx5 motifs)
Footprinting-based (2,314 extended summits (401bp) with Lhx5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lhx5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Lhx5.
The number of Lhx5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Lhx5.
View Lhx5 in a specific mouse sample

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