Lhx8 syntax in mouse based on all samples
Summary of Lhx8
Gene name: Lhx8, LIM homeobox 8
Number of Lhx8 PWM hits (motifs) on mouse genome: 117,236
Number of Lhx8 PWM hits (motifs) on mouse accessible genome: 34,205
Number of summits with Lhx8 motif per sample (min/median/max): 753 / 3,309 / 6,416
Number of summits with Lhx8 footprinting per sample (min/median/max): 50 / 175 / 260
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (107,345 extended summits (401bp) with Lhx8 motifs)
Footprinting-based (3,791 extended summits (401bp) with Lhx8 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Lhx8 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Lhx8.
The number of Lhx8 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Lhx8.
View Lhx8 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.