Nfic syntax in mouse based on all samples
Summary of Nfic
Gene name: Nfic, nuclear factor I C
Number of Nfic PWM hits (motifs) on mouse genome: 312,774
Number of Nfic PWM hits (motifs) on mouse accessible genome: 152,709
Number of summits with Nfic motif per sample (min/median/max): 1,706 / 6,405 / 39,784
Number of summits with Nfic footprinting per sample (min/median/max): 67 / 392 / 2,563
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (3,284,935 extended summits (401bp) with Nfic motifs)
Footprinting-based (144,948 extended summits (401bp) with Nfic footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nfic partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nfic.
The number of Nfic partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nfic.
View Nfic in a specific mouse sample

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