Nkx1-1 syntax in mouse based on all samples
Summary of Nkx1-1
Gene name: Nkx1-1, NK1 homeobox 1
Number of Nkx1-1 PWM hits (motifs) on mouse genome: 38,705
Number of Nkx1-1 PWM hits (motifs) on mouse accessible genome: 13,734
Number of summits with Nkx1-1 motif per sample (min/median/max): 484 / 2,008 / 3,394
Number of summits with Nkx1-1 footprinting per sample (min/median/max): 26 / 88 / 143
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (17,342 extended summits (401bp) with Nkx1-1 motifs)
Footprinting-based (542 extended summits (401bp) with Nkx1-1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nkx1-1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nkx1-1.
The number of Nkx1-1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nkx1-1.
View Nkx1-1 in a specific mouse sample

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