Nobox syntax in mouse based on all samples
Summary of Nobox
Gene name: Nobox, NOBOX oogenesis homeobox
Number of Nobox PWM hits (motifs) on mouse genome: 89,883
Number of Nobox PWM hits (motifs) on mouse accessible genome: 20,354
Number of summits with Nobox motif per sample (min/median/max): 897 / 897 / 897
Number of summits with Nobox footprinting per sample (min/median/max): 31 / 31 / 31
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,571 extended summits (401bp) with Nobox motifs)
Footprinting-based (42 extended summits (401bp) with Nobox footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nobox partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nobox.
The number of Nobox partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nobox.
View Nobox in a specific mouse sample

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