Nrf1 syntax in mouse based on all samples
Summary of Nrf1
Gene name: Nrf1, nuclear respiratory factor 1
Number of Nrf1 PWM hits (motifs) on mouse genome: 77,597
Number of Nrf1 PWM hits (motifs) on mouse accessible genome: 35,578
Number of summits with Nrf1 motif per sample (min/median/max): 3,981 / 6,926 / 11,830
Number of summits with Nrf1 footprinting per sample (min/median/max): 179 / 819 / 1,202
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,373,185 extended summits (401bp) with Nrf1 motifs)
Footprinting-based (206,879 extended summits (401bp) with Nrf1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Nrf1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Nrf1.
The number of Nrf1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Nrf1.
View Nrf1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.