PRDM1 syntax in human based on all samples
Summary of PRDM1
Gene name: PRDM1, PR/SET domain 1
Number of PRDM1 PWM hits (motifs) on human genome: 1,421,402
Number of PRDM1 PWM hits (motifs) on human accessible genome: 432,155
Number of summits with PRDM1 motif per sample (min/median/max): 6,904 / 19,572 / 49,214
Number of summits with PRDM1 footprinting per sample (min/median/max): 148 / 777 / 2,008
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (6,719,736 extended summits (401bp) with PRDM1 motifs)
Footprinting-based (174,946 extended summits (401bp) with PRDM1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of PRDM1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is PRDM1.
The number of PRDM1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is PRDM1.
View PRDM1 in a specific human sample

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