Pbx1 syntax in mouse based on all samples
Summary of Pbx1
Gene name: Pbx1, PBX homeobox 1
Number of Pbx1 PWM hits (motifs) on mouse genome: 482,993
Number of Pbx1 PWM hits (motifs) on mouse accessible genome: 121,931
Number of summits with Pbx1 motif per sample (min/median/max): 1,916 / 5,911 / 16,030
Number of summits with Pbx1 footprinting per sample (min/median/max): 85 / 359 / 838
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,754,631 extended summits (401bp) with Pbx1 motifs)
Footprinting-based (68,334 extended summits (401bp) with Pbx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pbx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Pbx1.
The number of Pbx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Pbx1.
View Pbx1 in a specific mouse sample

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