Pbx3 syntax in mouse based on all samples
Summary of Pbx3
Gene name: Pbx3, PBX homeobox 3
Number of Pbx3 PWM hits (motifs) on mouse genome: 210,511
Number of Pbx3 PWM hits (motifs) on mouse accessible genome: 77,666
Number of summits with Pbx3 motif per sample (min/median/max): 2,393 / 5,138 / 12,658
Number of summits with Pbx3 footprinting per sample (min/median/max): 87 / 274 / 699
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,699,331 extended summits (401bp) with Pbx3 motifs)
Footprinting-based (62,814 extended summits (401bp) with Pbx3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pbx3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Pbx3.
The number of Pbx3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Pbx3.
View Pbx3 in a specific mouse sample

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