Pitx1 syntax in mouse based on all samples
Summary of Pitx1
Gene name: Pitx1, paired like homeodomain 1
Number of Pitx1 PWM hits (motifs) on mouse genome: 156,406
Number of Pitx1 PWM hits (motifs) on mouse accessible genome: 44,961
Number of summits with Pitx1 motif per sample (min/median/max): 262 / 2,295 / 7,054
Number of summits with Pitx1 footprinting per sample (min/median/max): 16 / 134 / 378
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (101,998 extended summits (401bp) with Pitx1 motifs)
Footprinting-based (3,754 extended summits (401bp) with Pitx1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Pitx1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Pitx1.
The number of Pitx1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Pitx1.
View Pitx1 in a specific mouse sample

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