Prrxl1 syntax in mouse based on all samples
Summary of Prrxl1
Gene name: Prrxl1, dorsal root ganglia homeobox
Number of Prrxl1 PWM hits (motifs) on mouse genome: 52,435
Number of Prrxl1 PWM hits (motifs) on mouse accessible genome: 9,399
Number of summits with Prrxl1 motif per sample (min/median/max): 23 / 473 / 1,429
Number of summits with Prrxl1 footprinting per sample (min/median/max): 1 / 43 / 80
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (25,069 extended summits (401bp) with Prrxl1 motifs)
Footprinting-based (859 extended summits (401bp) with Prrxl1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Prrxl1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Prrxl1.
The number of Prrxl1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Prrxl1.
View Prrxl1 in a specific mouse sample

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