Rbpj syntax in mouse based on all samples
Summary of Rbpj
Gene name: Rbpj, recombination signal binding protein for immunoglobulin kappa J region
Number of Rbpj PWM hits (motifs) on mouse genome: 239,620
Number of Rbpj PWM hits (motifs) on mouse accessible genome: 93,835
Number of summits with Rbpj motif per sample (min/median/max): 1,000 / 3,886 / 15,364
Number of summits with Rbpj footprinting per sample (min/median/max): 54 / 251 / 944
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,110,799 extended summits (401bp) with Rbpj motifs)
Footprinting-based (80,328 extended summits (401bp) with Rbpj footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rbpj partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rbpj.
The number of Rbpj partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rbpj.
View Rbpj in a specific mouse sample

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