Rel syntax in mouse based on all samples
Summary of Rel
Gene name: Rel, REL proto-oncogene, NF-kB subunit
Number of Rel PWM hits (motifs) on mouse genome: 532,378
Number of Rel PWM hits (motifs) on mouse accessible genome: 153,467
Number of summits with Rel motif per sample (min/median/max): 1,383 / 6,728 / 21,665
Number of summits with Rel footprinting per sample (min/median/max): 19 / 204 / 772
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,335,060 extended summits (401bp) with Rel motifs)
Footprinting-based (45,918 extended summits (401bp) with Rel footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Rel partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Rel.
The number of Rel partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Rel.
View Rel in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.