Scrt2 syntax in mouse based on all samples
Summary of Scrt2
Gene name: Scrt2, scratch family transcriptional repressor 2
Number of Scrt2 PWM hits (motifs) on mouse genome: 139,984
Number of Scrt2 PWM hits (motifs) on mouse accessible genome: 43,126
Number of summits with Scrt2 motif per sample (min/median/max): 429 / 2,852 / 4,981
Number of summits with Scrt2 footprinting per sample (min/median/max): 14 / 138 / 279
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (203,870 extended summits (401bp) with Scrt2 motifs)
Footprinting-based (6,556 extended summits (401bp) with Scrt2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Scrt2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Scrt2.
The number of Scrt2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Scrt2.
View Scrt2 in a specific mouse sample

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