Smad5 syntax in mouse based on all samples
Summary of Smad5
Gene name: Smad5, SMAD family member 5
Number of Smad5 PWM hits (motifs) on mouse genome: 170,898
Number of Smad5 PWM hits (motifs) on mouse accessible genome: 58,171
Number of summits with Smad5 motif per sample (min/median/max): 563 / 2,669 / 7,022
Number of summits with Smad5 footprinting per sample (min/median/max): 35 / 210 / 495
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,285,553 extended summits (401bp) with Smad5 motifs)
Footprinting-based (61,151 extended summits (401bp) with Smad5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Smad5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Smad5.
The number of Smad5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Smad5.
View Smad5 in a specific mouse sample

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