T syntax in mouse based on all samples
Summary of T
Gene name: T, T-box transcription factor T
Number of T PWM hits (motifs) on mouse genome: 10,610,857
Number of T PWM hits (motifs) on mouse accessible genome: 3,261,604
Number of summits with T motif per sample (min/median/max): 79,648 / 143,187 / 208,731
Number of summits with T footprinting per sample (min/median/max): 86 / 212 / 355
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,761,276 extended summits (401bp) with T motifs)
Footprinting-based (3,209 extended summits (401bp) with T footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of T partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is T.
The number of T partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is T.
View T in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.