Tbx6 syntax in mouse based on all samples
Summary of Tbx6
Gene name: Tbx6, T-box transcription factor 6
Number of Tbx6 PWM hits (motifs) on mouse genome: 42,204
Number of Tbx6 PWM hits (motifs) on mouse accessible genome: 11,612
Number of summits with Tbx6 motif per sample (min/median/max): 52 / 400 / 1,124
Number of summits with Tbx6 footprinting per sample (min/median/max): 1 / 22 / 55
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (99,110 extended summits (401bp) with Tbx6 motifs)
Footprinting-based (3,684 extended summits (401bp) with Tbx6 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Tbx6 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Tbx6.
The number of Tbx6 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Tbx6.
View Tbx6 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.