Tef syntax in mouse based on all samples
Summary of Tef
Gene name: Tef, TEF transcription factor, PAR bZIP family member
Number of Tef PWM hits (motifs) on mouse genome: 197,785
Number of Tef PWM hits (motifs) on mouse accessible genome: 38,942
Number of summits with Tef motif per sample (min/median/max): 141 / 967 / 5,445
Number of summits with Tef footprinting per sample (min/median/max): 3 / 47 / 541
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (604,834 extended summits (401bp) with Tef motifs)
Footprinting-based (20,316 extended summits (401bp) with Tef footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Tef partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Tef.
The number of Tef partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Tef.
View Tef in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.