Trps1 syntax in mouse based on all samples
Summary of Trps1
Gene name: Trps1, transcriptional repressor GATA binding 1
Number of Trps1 PWM hits (motifs) on mouse genome: 114,872
Number of Trps1 PWM hits (motifs) on mouse accessible genome: 16,399
Number of summits with Trps1 motif per sample (min/median/max): 45 / 450 / 1,924
Number of summits with Trps1 footprinting per sample (min/median/max): 1 / 22 / 126
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (243,035 extended summits (401bp) with Trps1 motifs)
Footprinting-based (6,332 extended summits (401bp) with Trps1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Trps1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Trps1.
The number of Trps1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Trps1.
View Trps1 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.