Number of Vdr PWM hits (motifs) on mouse accessible genome:
167,704
Number of summits with Vdr motif per sample (min/median/max):
1,888 / 7,592 / 19,141
Number of summits with Vdr footprinting per sample (min/median/max):
87 / 430 / 1,093
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,409,533 extended summits (401bp) with Vdr motifs)
Footprinting-based (48,761 extended summits (401bp) with Vdr footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Vdr partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Vdr.
The number of Vdr partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Vdr.