Zkscan1 syntax in mouse based on all samples
Summary of Zkscan1
Gene name: Zkscan1, Zinc Finger with KRAB and SCAN domains 1
Number of Zkscan1 PWM hits (motifs) on mouse genome: 200,375
Number of Zkscan1 PWM hits (motifs) on mouse accessible genome: 58,294
Number of summits with Zkscan1 motif per sample (min/median/max): 401 / 2,211 / 6,246
Number of summits with Zkscan1 footprinting per sample (min/median/max): 15 / 89 / 264
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,124,259 extended summits (401bp) with Zkscan1 motifs)
Footprinting-based (26,494 extended summits (401bp) with Zkscan1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Zkscan1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Zkscan1.
The number of Zkscan1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Zkscan1.
View Zkscan1 in a specific mouse sample

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