Number of CRX PWM hits (motifs) on human accessible genome:
79,493
Number of summits with CRX motif per sample (min/median/max):
873 / 1,503 / 11,518
Number of summits with CRX footprinting per sample (min/median/max):
43 / 85 / 763
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (88,476 extended summits (401bp) with CRX motifs)
Footprinting-based (2,733 extended summits (401bp) with CRX footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of CRX partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based) Red dot is CRX.
The number of CRX partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based) Red dot is CRX.