CTCF syntax in human based on all samples
Summary of CTCF
Gene name: CTCF, CCCTC-binding factor
Number of CTCF PWM hits (motifs) on human genome: 958,766
Number of CTCF PWM hits (motifs) on human accessible genome: 411,341
Number of summits with CTCF motif per sample (min/median/max): 13,461 / 42,641 / 106,387
Number of summits with CTCF footprinting per sample (min/median/max): 540 / 2,989 / 8,617
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (12,266,134 extended summits (401bp) with CTCF motifs)
Footprinting-based (738,160 extended summits (401bp) with CTCF footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of CTCF partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is CTCF.
The number of CTCF partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is CTCF.
View CTCF in a specific human sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.