Number of HMGA2 PWM hits (motifs) on human genome:
62,858
Number of HMGA2 PWM hits (motifs) on human accessible genome:
9,215
Number of summits with HMGA2 motif per sample (min/median/max):
45 / 266 / 960
Number of summits with HMGA2 footprinting per sample (min/median/max):
1 / 9 / 64
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (123,023 extended summits (401bp) with HMGA2 motifs)
Footprinting-based (2,181 extended summits (401bp) with HMGA2 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of HMGA2 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based) Red dot is HMGA2.
The number of HMGA2 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based) Red dot is HMGA2.