Number of HOXA1 PWM hits (motifs) on human genome:
1,478,678
Number of HOXA1 PWM hits (motifs) on human accessible genome:
277,389
Number of summits with HOXA1 motif per sample (min/median/max):
3,524 / 8,438 / 20,845
Number of summits with HOXA1 footprinting per sample (min/median/max):
83 / 170 / 380
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,484,369 extended summits (401bp) with HOXA1 motifs)
Footprinting-based (14,274 extended summits (401bp) with HOXA1 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of HOXA1 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based) Red dot is HOXA1.
The number of HOXA1 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based) Red dot is HOXA1.