Number of NANOG PWM hits (motifs) on human genome:
974,624
Number of NANOG PWM hits (motifs) on human accessible genome:
240,770
Number of summits with NANOG motif per sample (min/median/max):
3,648 / 6,521 / 32,589
Number of summits with NANOG footprinting per sample (min/median/max):
185 / 355 / 2,484
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (747,590 extended summits (401bp) with NANOG motifs)
Footprinting-based (24,697 extended summits (401bp) with NANOG footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of NANOG partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based) Red dot is NANOG.
The number of NANOG partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based) Red dot is NANOG.