Number of SHOX PWM hits (motifs) on human accessible genome:
26,157
Number of summits with SHOX motif per sample (min/median/max):
166 / 487 / 1,512
Number of summits with SHOX footprinting per sample (min/median/max):
1 / 6 / 46
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (52,664 extended summits (401bp) with SHOX motifs)
Footprinting-based (407 extended summits (401bp) with SHOX footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of SHOX partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based) Red dot is SHOX.
The number of SHOX partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based) Red dot is SHOX.