TRIM28 syntax in human based on all samples
Summary of TRIM28
Gene name: TRIM28, tripartite motif containing 28
Number of TRIM28 PWM hits (motifs) on human genome: 65,207
Number of TRIM28 PWM hits (motifs) on human accessible genome: 42,439
Number of summits with TRIM28 motif per sample (min/median/max): 2,890 / 8,564 / 15,513
Number of summits with TRIM28 footprinting per sample (min/median/max): 181 / 998 / 2,157
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (2,929,219 extended summits (401bp) with TRIM28 motifs)
Footprinting-based (275,359 extended summits (401bp) with TRIM28 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of TRIM28 partners on the same summit (Motif-based)
Density profile of all expressed TFs in human (Motif-based)
Red dot is TRIM28.
The number of TRIM28 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in human (Footprinting-based)
Red dot is TRIM28.
View TRIM28 in a specific human sample

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