Number of Alx3 PWM hits (motifs) on mouse accessible genome:
19,918
Number of summits with Alx3 motif per sample (min/median/max):
92 / 1,047 / 4,113
Number of summits with Alx3 footprinting per sample (min/median/max):
3 / 60 / 169
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (63,728 extended summits (401bp) with Alx3 motifs)
Footprinting-based (1,970 extended summits (401bp) with Alx3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Alx3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Alx3.
The number of Alx3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Alx3.