Atf5 syntax in mouse based on all samples
Summary of Atf5
Gene name: Atf5, activating transcription factor 5
Number of Atf5 PWM hits (motifs) on mouse genome: 286,037
Number of Atf5 PWM hits (motifs) on mouse accessible genome: 66,092
Number of summits with Atf5 motif per sample (min/median/max): 305 / 2,132 / 6,536
Number of summits with Atf5 footprinting per sample (min/median/max): 13 / 118 / 418
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (1,160,203 extended summits (401bp) with Atf5 motifs)
Footprinting-based (37,508 extended summits (401bp) with Atf5 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Atf5 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based)
Red dot is Atf5.
The number of Atf5 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based)
Red dot is Atf5.
View Atf5 in a specific mouse sample

© TFSyntax 2024. This application is designed & developed by Yongbing Zhao.