Number of Hdx PWM hits (motifs) on mouse accessible genome:
12,986
Number of summits with Hdx motif per sample (min/median/max):
75 / 607 / 1,592
Number of summits with Hdx footprinting per sample (min/median/max):
1 / 20 / 74
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (90,350 extended summits (401bp) with Hdx motifs)
Footprinting-based (2,184 extended summits (401bp) with Hdx footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hdx partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hdx.
The number of Hdx partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hdx.