Number of Hoxa3 PWM hits (motifs) on mouse genome:
117,112
Number of Hoxa3 PWM hits (motifs) on mouse accessible genome:
33,665
Number of summits with Hoxa3 motif per sample (min/median/max):
134 / 1,161 / 6,151
Number of summits with Hoxa3 footprinting per sample (min/median/max):
7 / 73 / 296
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (225,202 extended summits (401bp) with Hoxa3 motifs)
Footprinting-based (7,566 extended summits (401bp) with Hoxa3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxa3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxa3.
The number of Hoxa3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxa3.