Number of Hoxb3 PWM hits (motifs) on mouse genome:
123,584
Number of Hoxb3 PWM hits (motifs) on mouse accessible genome:
34,415
Number of summits with Hoxb3 motif per sample (min/median/max):
120 / 1,253 / 5,850
Number of summits with Hoxb3 footprinting per sample (min/median/max):
5 / 76 / 273
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (202,158 extended summits (401bp) with Hoxb3 motifs)
Footprinting-based (6,625 extended summits (401bp) with Hoxb3 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxb3 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxb3.
The number of Hoxb3 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxb3.