Number of Hoxb4 PWM hits (motifs) on mouse genome:
67,690
Number of Hoxb4 PWM hits (motifs) on mouse accessible genome:
17,208
Number of summits with Hoxb4 motif per sample (min/median/max):
72 / 371 / 2,743
Number of summits with Hoxb4 footprinting per sample (min/median/max):
2 / 19 / 115
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (143,661 extended summits (401bp) with Hoxb4 motifs)
Footprinting-based (3,950 extended summits (401bp) with Hoxb4 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxb4 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxb4.
The number of Hoxb4 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxb4.