Number of Hoxc4 PWM hits (motifs) on mouse genome:
69,743
Number of Hoxc4 PWM hits (motifs) on mouse accessible genome:
16,936
Number of summits with Hoxc4 motif per sample (min/median/max):
63 / 559 / 2,759
Number of summits with Hoxc4 footprinting per sample (min/median/max):
1 / 35 / 131
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (94,301 extended summits (401bp) with Hoxc4 motifs)
Footprinting-based (2,617 extended summits (401bp) with Hoxc4 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxc4 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxc4.
The number of Hoxc4 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxc4.