Number of Hoxc9 PWM hits (motifs) on mouse genome:
91,374
Number of Hoxc9 PWM hits (motifs) on mouse accessible genome:
23,864
Number of summits with Hoxc9 motif per sample (min/median/max):
94 / 1,084 / 5,834
Number of summits with Hoxc9 footprinting per sample (min/median/max):
2 / 50 / 419
Positional profile of TF binding sites
For each transcription factor, positional profile shows where the factor will bind on the regulatory elements. The positions are relative to those summits of regulatory elements. The data are based on motif or footprinting data.
Motif-based (60,826 extended summits (401bp) with Hoxc9 motifs)
Footprinting-based (2,238 extended summits (401bp) with Hoxc9 footprinting)
Density profile of TF binding sites
For each transcription factor, density profile shows how many partners (expressed TFs) may bind to the same regulatory elements. The data are based on motifs or footprinting within 201bp summits.
The number of Hoxc9 partners on the same summit (Motif-based)
Density profile of all expressed TFs in mouse (Motif-based) Red dot is Hoxc9.
The number of Hoxc9 partners on the same summit (Footprinting-based)
Density profile of all expressed TFs in mouse (Footprinting-based) Red dot is Hoxc9.